Protein Model on 7fi7_B_1_C_1 (TEMPLATE: 7fi7 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(KLRD1_HUMAN) B 1 (B) polymer(polypeptide(L)) [133 aa] NKG2-D type II integral membrane protein :NKG2D_HUMAN
2 b C 1 (C) polymer(polypeptide(L)) [264 aa] MHC class I polypeptide-related sequence A :MICA_HUMAN 112Q(K) 113Q(S) 114F(Y) 142P(T) 143S(I) 144F(I) 145E 147F(M) 148N(Q) 160N(K) 162L(Y) 170N (identity: 16.7 %/33.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7fi7_B_1 identity=33.1%
queryA        55:DSDCCSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIA: 154
                : * *  *   *  *  ***    * * * **   * **  ***        *         * **        * ** ** **  *    *      *  :
7fi7_B_1      16:ESYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKSYHWMGLVHIPTNGSWQWEDGSILSPNLLTIIE-MQKGDCAL: 114
SecStr          :       STT EE SSEEEEEEEEEE HHHHHHHHHTTT EE     TTTTGGGGG  S EEEEEEE TTTS EEETTS B  TTS EEEE- SS SEEE:    
ExpBur          :eeeeeeeeeebeeeeebbbeebeeeebbeebeebbeeeebebbbbebeeebeebeebeeebbbbbeebeeeeebebeeeeebeeebbeeee-eeebebbb:    
Contact         :                                                         bbb                           bbbb bb      

queryA       155:YNPNGNALDESCEDKNRYICKQQLI: 179
                :*        * *   * *** *   :
7fi7_B_1     115:YASSFKGYIENCSTPNTYICMQRTV: 139
SecStr          :EETTTEEEEE TTS EEEEEEEE  :    
ExpBur          :bbeebebbbbebeeebebbbbeebe:    
Contact         :     b b       b                                                                                    


Input Residue Numbers for Focused Sites

ex) 2,15,123