Protein Model on 8se6_A_1_E_1 (TEMPLATE: 8se6 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(KLRD1_HUMAN) A 1 (A) polymer(polypeptide(L)) [121 aa] NKG2-D type II integral membrane protein :NKG2D_HUMAN
2 b E 1 (A) non-polymer(PGE) TRIETHYLENE GLYCOL 102T(K) 139Y(N) 140L 142P(T) 158N(S) 159G(F) (identity: 16.7 %/33.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8se6_A_1 identity=33.1%
queryA        55:DSDCCSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIA: 154
                : * *  *   *  *  ***    * * * **   * **  ***        *         * **        * ** ** **  *    *      *  :
8se6_A_1       6:ESYCGPCPKNWICYKNNCYQFFDEEKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKSYHWMGLVHIPXXXXWQWEDGSSLSPNLLTIIE-MQKGDCAL: 104
SecStr          :        TTSEEETTEEEEEEEEEE HHHHHHHHHHTT EE     TTTTGGGGG  S EEEEEE   ---- EETTS B  TTS EEEE-SSSSSEEE:    
ExpBur          :eeeeeeeeeebeeeeebbbeebeeeebbeebbebbeeeebebbebebeeebebbeebeeebbbbbbeee----eebeeeeeeeeebbeeee-eeeeebbb:    
Contact         :                                               b                                    bb b            

queryA       155:YNPNGNALDESCEDKNRYICKQQLI: 179
                :*        * *   * *** *   :
8se6_A_1     105:YASSFKGYIENCSTPNTYICMQRTV: 129
SecStr          :EETTTEEEEE TTS EEEEEEE   :    
ExpBur          :bbeebebebbebeeebbbbbbbeee:    
Contact         :   bb                                                                                               


Input Residue Numbers for Focused Sites

ex) 2,15,123