Protein Model on 7nl7_A_1_E_1 (TEMPLATE: 7nl7 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(KLRD1_HUMAN) A 1 (A) polymer(polypeptide(L)) [132 aa] DC-SIGN, CRD domain :CD209_HUMAN
2 b E 1 (A) non-polymer(UH5) 3-Aminopropyl 2-deoxy-2-(4-phenyl-1,2,3-triazol-1-yl)-alpha-D-mannopyranoside 114F 150K(E) 154A(E) 156N(S) 162L(N) 163D 164E(D) (identity: 28.6 %/33.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7nl7_A_1 identity=33.3%
queryA        58:CCSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFM----SSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETF------: 147
                :*  *   *     **** *  *  *  *   *      *       *  *     * *  * * ***       * *  **     * ***         :
7nl7_A_1       8:CHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRFTWMGLSDLNQEGTWQWVDGSP----LLPSFKQYWNRGEP: 103
SecStr          :  SS TT EEETTEEEEE SS B HHHHHHHHHHTT EE    SHHHHHHHHHHHHHHT  EEEEEEEEEETTEEEETTS B----  GGGGGGB TT  :    
ExpBur          :eeebeeebeebeeebbbbbeeeeebeebbebbeeeebebbbbeeeebbeebbeebeeeeeebbbbbbbeeeeeebebeeeee----beeebeebbeeeee:    
Contact         :                                                            b                                     b 

queryA       148:---NTKNCIAYNPNGNALDESCEDKNRYICKQ: 176
                :       *     **   *  *      *** :
7nl7_A_1     104:NNVGEEDCAEFSGNG-WNDDKCNLAKFWICKK: 134
SecStr          :  TT   EEEEETTE-EEEE TTS BEEEEEE:    
ExpBur          :eeeeebbbbbbbeeb-bbbbebeeebbbbbbe:    
Contact         :b    b   b b     bbb                                                                                


Input Residue Numbers for Focused Sites

ex) 2,15,123