Protein Model on 2cl8_A_1_C_1 (TEMPLATE: 2cl8 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(KLRD1_HUMAN) A 1 (A) polymer(polypeptide(L)) [129 aa] DECTIN-1 :Q6QLQ4_MOUSE
2 b C 1 (C) branched(oligosaccharide) beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose 87H(R) 90A(S) 93K(G) 94S(A) 95S(H) 131E 177Q(E) (identity: 14.3 %/33.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:2cl8_A_1 identity=33.3%
queryA        60:SCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFM---SSSQQF--YWIGLSYSEEHTAWLWENGSALSQYLFP-SFETFNT----: 149
                :**   *      **  *     *  *   *      **   *  *  *     **      *****       * ** ***     ** **   *     :
2cl8_A_1       6:SCLPNWIMHGKSCYLFSFSGNSWYGSKRHCSQLGAHLLKIDNSKEFEFIESQTSSHRINAFWIGLSRNQSEGPWFWEDGSA----FFPNSFQVRNAVPQE: 101
SecStr          :   TT EEETTEEEEEE S   HHHHHHHHHHTT EE    SHHHHHHHHHHHHTTTTSEEEEEEE SSTTS  EETTS B----   SS   BS SSGG:    
ExpBur          :eeeeebeeeeebbbbbbeeeeebeebeeebeeeebbbbbbeeeebbebbeeebeeeeeebbbbbbbbeeeeeebebeeeee----beeeebebeeeeeee:    
Contact         :                           b  b  bbb                                        b                       

queryA       150:---KNCIAYNPNGNALDESCEDKNRYICKQQL: 178
                :    **             *      **   *:
2cl8_A_1     102:SLLHNCV-WIHGSEVYNQICNTSSYSICEKEL: 132
SecStr          :GTT  EE-EEETTEEEEE TT   EEEEEEE :    
ExpBur          :beeebbb-bbebeebebeebeeebebbbbeee:    
Contact         :                              b                                                                     


Input Residue Numbers for Focused Sites

ex) 2,15,123