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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(KLRD1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [130 aa] | mDC-SIGN2 TYPE I ISOFORM | |
2 | b | C 1 (C) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose | 109S 112Q(N) 113Q(R) 114F 142P(N) 145E 147F(N) 149T(S) 156N(S) 157P(G) 162L(N) 163D 164E(N) (identity: 30.8 %/34.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1k9j_A_1 identity=34.7% |
queryA 58:CCSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFM----SSSQQFYWIGLSYSEEHTAWLWENGSALS---QYLFPSFETFNTK: 150 :* * * **** * * * * * * * * * * * * *** * * ** ** * * * * : 1k9j_A_1 5:CRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSG: 104 SecStr : TT EEETTEEEEE SS B HHHHHHHHHHTT EE HHHHHHHHHHHHHHT EEEEEE SSSTT EETTS B GGGGGGB TT TT: ExpBur :eeebeeebeeeeeebbeebeeeeebeebbebbeeeebebbbbeebebbebbbeebeeeeeebbbbbbbeeeeeebebeeeeebeeebeebbeeeeeeeee: Contact : bb bbb b b b b queryA 151:N--CIAYNPNGNALDESCEDKNRYICKQ: 176 :* * * * * * *** : 1k9j_A_1 105:NEDCAEFSGSG-WNDNRCDVDNYWICKK: 131 SecStr :S EEEEETTE-EEEE TTS BEEEEEE: ExpBur :ebbbbbbbeeb-bbbbebeeebbbbbbe: Contact : b bb bbb |