Protein Model on 4s0u_A_1_B_1 (TEMPLATE: 4s0u )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(KLRD1_HUMAN) A 1 (A) polymer(polypeptide(L)) [124 aa] NKG2-D type II integral membrane protein :NKG2D_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [126 aa] NKG2-D type II integral membrane protein :NKG2D_HUMAN 55D(E) 56S 57D(Y) 58C 59C(G) 60S(P) 61C 62Q(P) 64K(N) 65W 66V(I) 67G(C) 68Y 69R(K) 74F(Q) 75I(F) 107F(L) 109S(K) 110S(L) 111S(V) 112Q(K) 115Y(H) 157P(S) 176Q (identity: 25.0 %/33.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4s0u_A_1 identity=33.6%
queryA        55:DSDCCSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIA: 154
                : * *  *   *  *  ***    * * * **   * **  ***        *         * **        * ** ** **  *    *      *  :
4s0u_A_1       4:ESYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKSYHWMGLVHIPTNGSWQWEDGSILSPNLLTIIE-MQKGDCAL: 102
SecStr          :       STT EEETTEEEEEEEEEE HHHHHHHHHHTT EE     TTTTGGGGG  S EEEEEEEETTTTEEE TTS B  SSS EEE - SS SEEE:    
ExpBur          :eeeebeeeeebeeeeebbbeebeeeebbeebeebbeeeebebbebebeeebeebeebeeebbbbbebeeeeeeeebeeeeebeeebbeeee-eeebebbb:    
Contact         :bbbbbbbb bbbbbb    bb                               b bbbb  b                                       

queryA       155:YNPNGNALDESCEDKNRYICKQQ: 177
                :*        * *   * *** * :
4s0u_A_1     103:YASSFKGYIENCSTPNTYICMQR: 125
SecStr          :EETTTEEEEE TTS EEEEEEE :    
ExpBur          :bbeebebebeebeeebbbbbbee:    
Contact         :  b                  b                                                                              


Input Residue Numbers for Focused Sites

ex) 2,15,123