Protein Model on 1mpu_A_1_A_2
(TEMPLATE: 
1mpu
)Protein Model on 1mpu_A_1_A_2
(TEMPLATE: 1mpu
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(KLRD1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [128 aa] | NKG2-D type II integral membrane protein :NKG2D_HUMAN | |
| 2 | b | A 2 (A) | polymer(polypeptide(L)) [128 aa] | NKG2-D type II integral membrane protein :NKG2D_HUMAN | 55D(E) 56S 57D(Y) 58C 59C(G) 60S(P) 61C 62Q(P) 63E(K) 64K(N) 65W 66V(I) 67G(C) 68Y 75I(F) 91S 93K(N) 106D 107F(L) 110S(L) 111S(V) 112Q(K) 176Q (identity: 34.8 %/33.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1mpu_A_1 identity=33.6% |
queryA 55:DSDCCSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIA: 154
: * * * * * *** * * * ** * ** *** * * ** * ** ** ** * * * :
1mpu_A_1 15:ESYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKSYHWMGLVHIPTNGSWQWEDGSILSPNLLTIIE-MQKGDCAL: 113
SecStr : TT EE SS EEEEEEEEE HHHHHHHHHHTS EE TTT GGGGG SEEEEEEEE TTT EEETTS B TTS EEE -SS SEEE:
ExpBur :eeeeeeeeeebeeeeebbbbebeeeebbeebbebbeeeebebbebebeeebeebeeeeeebbbbbbeeeeeeeeebeeebeeeeebbeebe-eeebebbb:
Contact :bbbbbbbbbbbbbb b b b bb bbb
queryA 155:YNPNGNALDESCEDKNRYICKQQ: 177
:* * * * *** * :
1mpu_A_1 114:YASSFKGYIENCSTPNTYICMQR: 136
SecStr :EETTTEEEEE TTS EEEEEEE :
ExpBur :bbeebbbebbebeeeeebbbbee:
Contact : b
|
[assembly_id:1]
[help]