Protein Model on 7ol4_D_1_T_1
(TEMPLATE: 
7ol4
)Protein Model on 7ol4_D_1_T_1
(TEMPLATE: 7ol4
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DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(BASI_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [590 aa] | Neurofascin | |
| 2 | b | T 1 (T) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose | 41E(R) 43H(D) 88H(Y) 90A(N) 92T(S) (identity: 0.0 %/35.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7ol4_D_1 identity=35.6% |
queryA 40:VELHCEAVGSPVPEIQWWFEGQGPNDTCSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKWVRAQAVVLVLEP: 139
: * * *** * * *** * ** ** * ** * * * * * * * * * *:
7ol4_D_1 437:TRLDCPFFGSPIPTLRWFKNGQGSN------LDG---------GNYHVYENGSLEIKMIRKEDQGIYTCVAT-----NILGKA------ENQVRLEVKDP: 510
SecStr :EEE EE SS EEEEEETT SS ------ B---------TTBEE SSS EEESS GGG EEEEEEEE----- SS EE------EEEEEEEEE :
ExpBur :bebebebbbbbebebebebeeeeee------bee---------ebbeeeeebbbbbeebeeebebebbbbbe-----beeeeb------ebebebbbeeb:
Contact : b b b b b
queryA 140:GTVFTTVED----LGSKILLTCSLNDSATEVTGHRWLK-------GGVVLKEDALPGQKTEFKVDSDDQWGEYSCV: 204
: ** * * * *** * *** * * * ** * * * :
7ol4_D_1 511:TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKED---DSLTIFGVAERDQ-GSYTCM: 582
SecStr : EEEE EEE TT EEEE EEE SSS EEEEEETTEE TTEEEET---TEEEESS GGG -EEEEEE:
ExpBur :bebeeebeeeebeeeeebebebebeebeebeeeeebbbeeeeeeeeeebeeee---ebbbbeebeeebe-bbbbbe:
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[assembly_id:1]
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