Protein Model on 1nbq_B_1_A_1
(TEMPLATE: 
1nbq
)Protein Model on 1nbq_B_1_A_1
(TEMPLATE: 1nbq
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(BASI_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [208 aa] | Junctional adhesion molecule 1 :JAM1_HUMAN | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [209 aa] | Junctional adhesion molecule 1 :JAM1_HUMAN | 140G(T) 141T(V) 142V(N) 143F(I) 144T(P) 145T(S) 146V(S) (identity: 0.0 %/32.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1nbq_B_1 identity=32.2% |
queryA 40:VELHCEAVGSPVPEIQWWFEGQGPNDTCSQLWDGARLDRVH--IHATYHQHAA---STISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKWVRAQAVV: 134
:* * * * * * * ** * ** * * * * ****** * * * *:
1nbq_B_1 22:VKLSCAYSGFSSPRVEWKFD-QG---------DTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSY-------GEVKVKLIV: 104
SecStr : EEE EEES SSEEEEEEEE-ET---------TEEEESEETTEE TTTTTT EEETTEEE S TTS SEEEEEEEETTSS E-------E EEE E:
ExpBur :bebbbeeeebeeeebbbebe-ee---------eeeeebbeeeebbeebeeebeeeeebbebeebeeebbbebbbbbbbeeeebe-------bebebebbb:
queryA 135:LV--LEPGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVL: 178
:** * * **** * * * * * :
1nbq_B_1 105:LVPPSKPTVNIPSSATIGNRAVLTCSEQD-GSPPSEYTWFKDGIVM: 149
SecStr :EB SEEETTS EEE S- BS EEEEEETT :
ExpBur :bbebeebebebeeebeeeeebebebebee-bbbebebbbbbeeeeb:
Contact : bbbbbbb
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[assembly_id:1]
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