[pdbjlvh2]Protein Model on 1nbq_A

Protein Model on 1nbq_A_1 (TEMPLATE: 1nbq )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(BASI_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [209 aa]	Junctional adhesion molecule 1 :JAM1_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1nbq_A_1 identity=32.2%

queryA        40:VELHCEAVGSPVPEIQWWFEGQGPNDTCSQLWDGARLDRVH--IHATYHQHAA---STISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKWVRAQAVV: 134
                :* * *   *   *   * *  **         *  **      * * *          *       ****** *  *                *     *:
1nbq_A_1      22:VKLSCAYSGFSSPRVEWKFD-QG---------DTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSY-------GEVKVKLIV: 104
SecStr          : EEE EEES SSEEEEEEEE-ET---------TEEEESEETTEE TTTTTT EEETTEEE S   TTS SEEEEEEEETTSS E-------E  EEE  E:    
ExpBur          :bebbbeeeebeeeebbbebe-ee---------eeeeebbeeeebbeebeeebeeeeebbebeebeeebbbebbbbbbbeeeebe-------bebebebbb:    

queryA       135:LV--LEPGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVL: 178
                :**    *          *    ****  *         * * * * :
1nbq_A_1     105:LVPPSKPTVNIPSSATIGNRAVLTCSEQD-GSPPSEYTWFKDGIVM: 149
SecStr          :EB          SEEETTS EEE     S- BS  EEEEEETT   :    
ExpBur          :bbebeebebebeeeeeeeeebebebebee-bbbebebbbbbeeeeb:

Protein Model on 1nbq_A_1 (TEMPLATE: 1nbq )

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