[pdbjlvh2]Protein Model on 5fic_D_1_GA

Protein Model on 5fic_D_1_GA_1 (TEMPLATE: 5fic )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:4]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(ASM_HUMAN)	D 1 (D)	polymer(polypeptide(L)) [527 aa]	Sphingomyelin phosphodiesterase :ASM_MOUSE
2	b		GA 1 (D)	non-polymer(CL)	CHLORIDE ION	216L 217E 257R (identity: 100.0 %/88.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5fic_D_1 identity=88.4%

queryA        88:NLTCPICKGLFTAINLGLKKEPNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCGHWDIFSSWNISLPTVPKPP: 187
                :***** ** **** * ***************** *  * ***  **** ******* **** **************** ******** ****** *****:
5fic_D_1      11:NLTCPACKVLFTALNHGLKKEPNVARVGSVAIKICKMLNIAPLDVCQSAVHLFEDDVVEVWTRSVLSPSEACGLLLGSSCGHWDIFSTWNISLPSVPKPP: 110
SecStr          :  HHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHTTTTSS HHHHHHHHHHHHHHHHHHHHHTTT HHHHHHHHH GGG    TT        SS    :    
ExpBur          :eeebeebeeebeeebebbeeeebbeeebeeebeebeeeeebeeebbeebbeebbebebebebebeebbebbbbeeeeeebeeeebeeebebeeeeeeeee:    

queryA       188:PKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPAHDVW: 287
                :*************** ********** ******* ************ ** *  *** ****************** ******** **************:
5fic_D_1     111:PKPPSPPAPGAPVSRVLFLTDLHWDHEYLEGTDPYCADPLCCRRGSGWPPNSQKGAGFWGEYSKCDLPLRTLESLLKGLGPAGPFEMVYWTGDIPAHDVW: 210
SecStr          :        TT  EEEEEEE    B TTB TTS TT SSSS SBTTS   SSS     SS  SSS  B HHHHHHHHHT TTT   SEEEE    B S GG:    
ExpBur          :eeeeeeeeeeeeebebbbbbbbbbbeebeeebbbebebebbbbeebeebeeeeeebbebbbbbebbbbeebbebbbeebeebbebebbbbbbbbbbbbeb:    
Contact         :                            bb                                       b                              

queryA       288:HQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNMNFC: 387
                : * ********** * ************************ ****** ** ** **************** ** ********** * *************:
5fic_D_1     211:QQSRQDQLRALTTITDLVRKFLGPVPVYPAVGNHESTPVNGFPPPFIKGNQSSQWLYEAMAKAWEPWLPADALHTLRIGGFYALTPRPGLRLISLNMNFC: 310
SecStr          :G  HHHHHHHHHHHHHHHHHHHTTS EEE B SSSSSSTT    TT  STTSTHHHHHHHHHHTTTTS HHHHHHHHHHS EEE SSTTEEEEE BGGGS:    
ExpBur          :ebeeeebeebbeebbebbeeebeeeebbbbbbbbbbbbbbbbbbeebeeeebbebbbebbbebbeebbeeebbeebeebbbbbbeebeebbbbbbbbbbb:    

queryA       388:SRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFLAPSA: 487
                :********************** ****** ************************* * ******** ************ ********************:
5fic_D_1     311:SRENFWLLINSTDPAGQLQWLVEELQAAENRGDKVHIIGHIPPGHCLKSWSWNYYKIIARYENTLAGQFFGHTHVDEFEIFYDEETLSRPLAVAFLAPSA: 410
SecStr          : TT GGGGT  SSGGGHHHHHHHHHHHHHHHT EEEEE SS GGGS HHHHHHHHHHHHHTTTTEEEEEE SS S EEEEEE TTTS SEEEEEEE   S:    
ExpBur          :beebbbbebebebbeebbebbbebbbbbbeeebebbbbbbbbbbebbebbbebbbbbbbbbbbbbbbbbbbebbbbbbbbbbbeeebeebbbbbbbbbbb:    

queryA       488:TTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEPCG: 587
                :** * ************** ********************  *  * *  ***********   *  ********* * *********************:
5fic_D_1     411:TTFINLNPGYRVYQIDGNYPGSSHVVLDHETYILNLTQANAAGGTPSWKRLYRARETYGLPDAMPASWHNLVYRMRDDEQLFQTFWFLYHKGHPPSEPCG: 510
SecStr          :S TTT   EEEEEEEE SSTT    EEEEEEEEE HHHHSSTT    EEEEEEHHHHHT S SSHHHHHHHHHHHHH HHHHHHHHHHHTTT   SS   :    
ExpBur          :bbbeebbbbbbbbebbbeeeebbbbbbbbbbbbbbbeebeeeeeebebeebbebeeebebeebebebbbebbbebeeeeebbeebbebbbbbeeeeeebe:    

queryA       588:TPCRLATLCAQLSARADSPALCRHLMP: 614
                :***************************:
5fic_D_1     511:TPCRLATLCAQLSARADSPALCRHLMP: 537
SecStr          :HHHHHHHHHHHH  SSS GGGGTTT  :    
ExpBur          :eeebeebbeebbbbbbebeebbeebee:

Protein Model on 5fic_D_1_GA_1 (TEMPLATE: 5fic )

Input Residue Numbers for Focused Sites