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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ASM_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [415 aa] | Acid sphingomyelinase-like phosphodiesterase 3a :ASM3A_HUMAN | |
2 | b | X 1 (C) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 522N 524T 525Q(E) 579G(S) 580H(Y) 582P(S) (identity: 33.3 %/34.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5ebe_C_1 identity=34.6% |
queryA 193:PPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAG-PFDMVYWTGDIPAHDVWHQTR: 291 :*** * **** * * ** * * ** ** * ** * * * **** * * : 5ebe_C_1 2:PPAIG----QFWHVTDLHLDPTY-HITD-DHTKVCASSKGAN---ASNPGP--FGDV-LCDSPYQLILSAFDFIKNSGQEASFMIWTGDSPPHVPVPELS: 89 SecStr : SS E----EEEEE B TT - S-STTTS GGGTTS --- SS BT--TBBT-TB B HHHHHHHHHHHHSSS SEEEE S S GGG : ExpBur :eeeeb----bbbbbbbbbbbeeb-eeee-eeeebbbbbeeee---beebbe--bbbb-bbbbbeebbebbbeebeeeeeeeebbbbbbbbbbebeeeebe: queryA 292:QDQ-LRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYA--LSPYPGLRLISLNMNFCS: 388 : * * * * ** *** * * * * * * *** ** *** **** * ** **** * : 5ebe_C_1 90:TDTVINVITNMTTTIQSLFPNLQVFPALGNHDYWPQDQLPV-------VTSKVYNAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPNLRIISLNTNLYY: 182 SecStr :HHHHHHHHHHHHHHHHHH TT EEE TTSSSSTT S-------S HHHHHHHHHTGGGS HHHHHHHHHHS EEEEETTEEEEEEEEE GGGSB: ExpBur :eeebbebbeebbebbeebbeebbbbbbbbbbbbeeebbbbe-------eebebbebbbebbeebbeeebbeebeebbbbbbebeebeebbbbbbbbbbbe: queryA 389:RENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWN----YYR-----IVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLA: 479 : * * **** * ** * ** ** * * * * ** * * * ** **** * * * * : 5ebe_C_1 183:GPNI-MTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNITAMREYYNEKLIDIFQKYSDVIAGQFYGHTHRDSIMVLSDKK--GSPVN: 279 SecStr :TT G-GGTT SSGGGHHHHHHHHHHHHHHTT EEEEEESS SSB TTSTT BSB HHHHHHHHHHHHHTTTTEEEEEE SS S EEEEEE TT--S EEE: ExpBur :eebe-ebeeeebbbebbebbeebbeebeeeebebbbbbbbbbbbebeeeeebbbbeebbeebbebbbebeebbbbbbbbbbbbbbbbbbbeee--eebeb: queryA 480:VAFLAPSATTYIGL------NPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRG-DMQLFQTF: 572 : * ** * *** * * * ** * **** ** * * * * ** * * * * : 5ebe_C_1 280:SLFVAPAVTPVKSVLEKQTNNPGIRLFQ----YDPRDYKLLDMLQYYLNLTEANLKGE-SIWKLEYILTQTYDIEDLQPESLYGLAKQFTILDSKQFIKY: 374 SecStr :EEEE S SS S EEEEEE----E TTT EEEEEEEE HHHHHHHTS- EEEEEHHHHTT S S HHHHHHHHHHHHSTT HHHHHH: ExpBur :bbbbbbbbbbbbeeeeebbbbbbbbbbb----bbeeebebbbbbbbbbebeebbeeee-eebeebbebbebbebebbebebbeebbeebeeeebebbeeb: Contact : b bb queryA 573:WFLYHKGHPPSEPCGTPCRLATLCAQLSARADSPALC: 609 : * * * ** * * *: 5ebe_C_1 375:YNYFFVSYDSSVTCDKTCKAFQICAIMNLDNISYADC: 411 SecStr :HHTTTTTS SS HHHHHHHHHHHH SHHHHHHH: ExpBur :bebbbbbeeeebeeeeeebbbbbbbbbbbbeebbeee: Contact : bb b |