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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ASM_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [426 aa] | Acid sphingomyelinase-like phosphodiesterase 3a :ASM3A_MOUSE | |
2 | b | BA 1 (B) | non-polymer(GOL) | GLYCEROL | 201S(G) 273D(S) 373P(S) 374Y(N) 506Y 508G(P) (identity: 16.7 %/35.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5fca_B_1 identity=35.1% |
queryA 191:PSPPAPGAP-VSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAG-PFDMVYWTGDIPAHD-VW: 287 :* ** ** * **** * * ** * * ** ** * ** * * * **** * * * : 5fca_B_1 12:PLAPADRAPAVGQFWHVTDLHLDPTY-HITD-DRTKVCASSKGAN---ASNPGP--FGD-VLCDSPYQLILSAFDFIKNSGQEASFMIWTGDSPPHVPVP: 103 SecStr : SS EEEEEE B TT - S-SGGGS GGGTTS --- SS BT--TB -TTS B HHHHHHHHHHHHHS SEEEE S S GG: ExpBur :eeeeeeeeeeebbbbbbbbbbbbeeb-eeee-eeeebbebbeebe---beebbe--bbb-bbbbbbeebbebbbebbeeeeeebebbbbbbbbbbebeee: Contact : b b b queryA 288:HQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYA--LSPYPGLRLISLNMN: 385 : * * * * ** *** * * * * * * *** ** ** **** **** **** *: 5fca_B_1 104:ELSTGTVIKVITNMTMTVQNLFPNLQVFPALGNHDYWPQDQLPI-------VTSKVYSAVADLWKPWLGEEAISTLKKGGFYSQKVASNPGLRIISLNTN: 196 SecStr :G HHHHHHHHHHHHHHHHHH TT EEEE TTSSSSTT S-------S HHHHHHHHHHGGGS HHHHHHHHHHS EEEE TTSTTEEEEE GG: ExpBur :ebeeeebeebbeebbebbbeebeebbbbbbbbbbbbeeebbbbe-------eebebbebbbebbeebbeeebbebbeebbbbbeebeebeebbbbbbbbb: Contact : bb queryA 386:FCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGH---------CLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSR: 476 : * * **** * ** * ** ** * * * * ** * ** **** * * * : 5fca_B_1 197:LYYGPNI-MTLNKTDPANQFEWLENTLNSSLWNKEKVYIIAHVPVGYLPYATDTPAIRQYYNEKLLDIFRRYSSVIAGQFYGHTHRDSLMVLSDKN--GN: 293 SecStr :GG TT G-GGTT SSGGGHHHHHHHHHHHHHHTT EEEEEESS SSB TTSSS BSS HHHHHHHHHHHHHTTTTEEEEEE SS S EEEEEE TT--S : ExpBur :bbbeebe-ebeeeebbbebbebbeebbeebeeeebebbbbbbbbbbbbbeeeeebbbbeebbeebbebbeebbebbebbbbbbbbbbbbbbbbeee--ee: queryA 477:PLAVAFLAPSATTYIGL------NPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRM-RGDMQLF: 569 :** * ** * * *** * * * ** * **** ** * * * * * * ** * *: 5fca_B_1 294:PLNSVFVAPAVTPVKGVLQKETNNPGVRLFQ----YKPGDYTLLDMVQYYLNLTEANLKGE-SNWTLEYVLTQAYSVADLQPKSLYALVQQFATKDSKQF: 388 SecStr :EEEEEEE S TT S EEEEEE----E TTT EEEEEEEE HHHHHHHT - EEEEEHHHHHT S SSHHHHHHHHHHHHSTT HHH: ExpBur :bebbbbbbbbbbbbbeeeeebbbbbbbbbbe----beeeebbbebbbbbbbebeebbeeee-eebeebbbbbebbebebbeeebbeebbeebeeeebebb: Contact : b b queryA 570:QTFWFLYHKGHPPSEPCGTPCRLATLCA--QLSARADSPALCRHL: 612 : * * * * ** * * **: 5fca_B_1 389:LKYYHYYFVSYDSSATCDQHCKTLQVCAIMNLDSMSYDDCLKQHL: 433 SecStr :HHHHHHHTTTS TT HHHHHHHHHHHH SHHHHHHHHHHH : ExpBur :eebbebbbbbeeeebebeeebbbbbbbbbbbbbbebbeebbeeee: |