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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ASM_HUMAN) | A 4 (A) | polymer(polypeptide(L)) [528 aa] | Sphingomyelin phosphodiesterase :ASM_HUMAN | |
2 | b | C 4 (C) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 171D 177N 178I 179S 397N 399T 406Q (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5i85_A_4 identity=100.0% |
queryA 86:WGNLTCPICKGLFTAINLGLKKEPNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCGHWDIFSSWNISLPTVPK: 185 :****************************************************************************************************: 5i85_A_4 38:WGNLTCPICKGLFTAINLGLKKEPNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCGHWDIFSSWNISLPTVPK: 137 SecStr : GGGHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHTT S HHHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHH TTT TT SS : ExpBur :eeeeebeebeeebeeebeebeeeeebeeebeeebeebeeeeeeeeebbeeebeebbebebbbebebeebeebbbbeeeeeebbeeebeeebebeeeeeee: Contact : b bbb queryA 186:PPPKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPAHD: 285 :****************************************************************************************************: 5i85_A_4 138:PPPKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPAHD: 237 SecStr : TT EEEEEEE B TTB TTS TT SSSS SBTTS TTS SS SSS B HHHHHHHHHT GGG SEEEE S S S : ExpBur :eeeeeeeeeeeebeebebbbbbbbbbbeebeeebbbebebebbbbeebeeeeeeeeebbebbbebebbbbeebbebbbeebeebeebebbbbbbbbbbbb: queryA 286:VWHQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNMN: 385 :****************************************************************************************************: 5i85_A_4 238:VWHQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNMN: 337 SecStr :TTS HHHHHHHHHHHHHHHHHHHTTS EEE TTSSSSTT TT STTSSHHHHHHHHHHSTTTS HHHHHHHHHHS EEEEEETTEEEEE GG: ExpBur :bbebeeeebeebbeebbebbeeebeebebbbbbbbbbbbbbbbbbbeebeeeebbebbbebbbebbeebbeeebbebbeebbbbbbebbeebbbbbbbbb: queryA 386:FCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFLAP: 485 :****************************************************************************************************: 5i85_A_4 338:FCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFLAP: 437 SecStr :GT TT GGGGT SSGGGHHHHHHHHHHHHHHHT EEEEE SS GGGS HHHHHHHHHHHHHTTTTEEEEEE SS S EEEEEE TTTS SEEEEEEE : ExpBur :bbbeebbbbbbebebbeebbeebbebbbebbeeebebbbbbbbbbbebbebbbebbbebbbbbbebbbbbbbbebbbbbbbbbbbeeebeebbbbbbbbb: Contact : b b b queryA 486:SATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEP: 585 :****************************************************************************************************: 5i85_A_4 438:SATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEP: 537 SecStr : SS TTT EEEEEEEE SSTT EEEEEEEE HHHHTSTT EEEEEHHHHHT S SHHHHHHHHHHHHH HHHHHHHHHHHTTT SS : ExpBur :bbbbeebbbbbbbbbbbbbeeeebbbbbebbbbbbbebeebeeeeeebebeebbebeeebebeebbbebbeebbeebeeeeebbeebbebbbbeeeeeee: queryA 586:CGTPCRLATLCAQLSARADSPALCRHLM: 613 :****************************: 5i85_A_4 538:CGTPCRLATLCAQLSARADSPALCRHLM: 565 SecStr : HHHHHHHHHHHT STT GGGGTTT : ExpBur :beeeebbebbbebbebbbebeebbeebe: |