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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | X 1 (Y) | polymer(polypeptide(L)) [194 aa] | GTP-binding protein YPT32/YPT11 :YPT32_YEAST | |
2 | b | V 1 (W) | polymer(polypeptide(L)) [883 aa] | Trafficking protein particle complex II-specific subunit 120 :TR120_YEAST | 119P(A) 120F(V) 131N(H) 132R 135A(P) 140Q(K) 144Y(M) 148N(Q) 149I(M) 150P(L) 151Y(F) 152F(T) 153E 160I(D) 161N 164Q(K) 165A 168T(E) 169I(L) (identity: 21.1 %/36.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7ea3_X_1 identity=36.3% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107 :* * ******* * * * *** * * * ********** * **** * * * * : 7ea3_X_1 13:LFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELR: 112 SecStr :EEEEEEE TTSSHHHHHHHHSS S SSSSS EEEEEEEEETTEEEEEEEEE SS HHHHHHHTTT EEEEEEESS STTTTTHHHHHHHHH: ExpBur :ebbbbbbbbeebbbeebbeebbeeeeeeeeeeeebbbebeeebebeeeebebebbbbbeeeebeeebeeebeebbbbbbbbbbeeeebbebbeebbebbe: queryA 108:IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169 : * * *** ** * * * * * **** ** ** : 7ea3_X_1 113:ENA----DDNVAVGLIGNKSDLAHLRAVPTDEAKNFAM-ENQMLFTETSALNSDNVDKAFREL: 170 SecStr :SSS---- SS EEEEEEE SSTT SS HHHHHHHHH-TTT EEE SSS HHHHHHHHH: ExpBur :eeb----eeebbbbbbbbebeeeeeeebeeeebeebbe-eeebeebebbbeeeeebeebbeeb: Contact : bb bbb b b b bbbbbb bb bb bb |