Protein Model on 3cue_L_1_I_1
(TEMPLATE: 
3cue
)Protein Model on 3cue_L_1_I_1
(TEMPLATE: 3cue
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | L 1 (L) | polymer(polypeptide(L)) [166 aa] | GTP-binding protein YPT1 :YPT1_YEAST | |
| 2 | b | I 1 (I) | polymer(polypeptide(L)) [143 aa] | Transport protein particle 18 kDa subunit :BET5_YEAST | 39A(S) 41I 68E (identity: 66.7 %/38.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3cue_L_1 identity=38.1% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * * ***** * * *** ** * * * * *********** *** * *** * * * :
3cue_L_1 8:LFKLLLIGNSGVGKSCLLLRFSDDXXXXXYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEID: 107
SecStr :EEEE TTS HHHHHHTTS ----- SS EEEEEEEETTEEEEEEEE SSTHHHHHHHHSSS SBEEEE SS THHHHHHHHHHHHHH:
ExpBur :ebebbbbbeeebebeebbeeebee-----eeeeebbbebebebebeeebbebbbbbbebeeeeeebbeebbeebebbbbbbbbeeeebbebbeebbeebe:
Contact : b b b
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171
: * *** ** * * * **** *** ** * **:
3cue_L_1 108:RYATSTVLK----LLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMAR: 167
SecStr :HHS TT E----EEEE S S GGG S HHHHHHHHHHHT EEE SSS THHHHHHHHHHH:
ExpBur :eebeeebee----bbbbbebeeeeeeebeeeebeebbeeeebebebbeeeebeebeebbeebbe:
|
[assembly_id:2]
[help]