Protein Model on 1k5g_J_1_L_1
(TEMPLATE: 
1k5g
)Protein Model on 1k5g_J_1_L_1
(TEMPLATE: 1k5g
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | J 1 (J) | polymer(polypeptide(L)) [206 aa] | GTP-binding nuclear protein RAN :RAN_HUMAN | |
| 2 | b | L 1 (L) | polymer(polypeptide(L)) [344 aa] | Ran GTPase activating protein 1 :RNA1_SCHPO | 16D 18G 37Y 39A 41I(L) 42G 66G 67Q 68E 69R(K) 73L 77F(Y) 89D 91T 92A(S) 93P(R) 94N(V) 126K 131N(D) 133Q(K) (identity: 60.0 %/34.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1k5g_J_1 identity=34.0% |
queryA 6:KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDE: 105
: * * ** * *** * * ** * ******* * * * * * **** * * * :
1k5g_J_1 8:QVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRD: 107
SecStr : EEEEEEEEESTTSSHHHHHHHHHH S SEEEEEEEEEETTEEEEEEEEEE SSS SSGGGHHHHTT EEEEEEETT HHHHHTHHHHHHH:
ExpBur :eeebbbbbbbbeebbbebbbebbeeeeeeeeeeebeeeeeeebebebeeeebebbbebbbbeeeeeeebeebbeebebbbbbbbbbeeebbeebeebbeb:
Contact : b b b b bb bbbb b b b bbbb
queryA 106:FLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL: 174
: * ** * * *** * * * * * * * *** * * * ** :
1k5g_J_1 108:LV-----RVCENIPIVLCGNKVDIKDRKVKAKSIV--FHRKKNLQYYDISAKSNYNFEKPFLWLARKLI: 169
SecStr :TH-----HHH S EEEEEE TTSSS SS TTT --HHHHHT EEEE TTT TTTTHHHHHHHHHHH:
ExpBur :be-----eebeebebbbbbbebeeeeeebeeeebe--ebeeeebebbbbbbeeeebeeebbbbbbeeee:
Contact : b b b
|
[assembly_id:4]
[help]