Protein Model on 5o74_J_1_I_1
(TEMPLATE: 
5o74
)Protein Model on 5o74_J_1_I_1
(TEMPLATE: 5o74
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | J 1 (J) | polymer(polypeptide(L)) [164 aa] | Ras-related protein Rab-1B :RAB1B_HUMAN | |
| 2 | b | I 1 (I) | polymer(polypeptide(L)) [193 aa] | Multifunctional virulence effector protein DrrA :DRRA_LEGPN | 8L 10K 12I(L) 16D 17S 31K(D) 33F(Y) 34S(T) 35N(E) 36Q(S) 37Y 38K(I) 40T 41I 42G 43A(V) 44D 45F 58T(K) 60Q 62W 64T 65A 66G 67Q 68E 69R 70F 71Q(R) 72S(T) 76A(S) 77F(Y) 79R(U) 80G 98T(N) 102W (identity: 58.3 %/38.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5o74_J_1 identity=38.4% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******* * * *** ** * *********** * ** * *** * * :
5o74_J_1 8:LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYUGAHGIIVVYDVTDQESYANVKQWLQEID: 107
SecStr :EEEEEEE TTSSHHHHGGG B HHHHHH SEEEEEEEETTEEEEEEEE TTGGG S HHHHSS SEEEEEEETT HHHHHHHHHHHHHHH:
ExpBur :ebebbbbbeeebebeebbeebeeeeeeeeeeeeeeeebbeeebebeeeebbbbbebeeebeeebebeeebbeebebbbbbbbbeeeebbeebeebbeebb:
Contact :b b b bb b bbbbbb bbbbbb b b b bbbbbbbbb bb bb b b
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
: ** ** *** * ** ***** * ****** * *:
5o74_J_1 108:RYAS----ENVNKLLVGNKXXXXXXKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMA: 166
SecStr :HHS ----TTSEEEEEEE ------ S HHHHHHHHHHHT EEEEBTTTTBSHHHHHHHHH:
ExpBur :eebe----eebbbbbbbbe------eebeeeebeebbeeeebebbebbbeeeeebeebbeebb:
|
[assembly_id:5]
[help]