[pdbjlvh2]Protein Model on 6ixv_F

Protein Model on 6ixv_F_1 (TEMPLATE: 6ixv )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(RAB7A_HUMAN)	F 1 (F)	polymer(polypeptide(L)) [170 aa]	Ras-related protein Rab-11A :RB11A_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6ixv_F_1 identity=42.7%

queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :* **   *******  *        *    * ***  * *    **      **********      * ****    ** *     *      *  *  :
6ixv_F_1      13:LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR: 112
SecStr          :  EEEEEE TTSSSTTTSTTTSEE  SS STTTTS  EEEEEEEETTEEEEEEEE    SS  SSTTTTTSTT  EEEEEEETT HHHHHHHHHHHHHHT:    
ExpBur          :ebebbbbbbeebebeeebeebbeeeeeeebeeeebbbebbeebebeeebbbbbbbbbbbeeebeeebeebbeebebbbbbbbbbeeebbebbeebbeebe:    

queryA       108:IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169
                :  *      *      *** **   * * *  * *    **     ****    *** *****:
6ixv_F_1     113:DHADS----NIVIMLVGNKSDLRHLRAVPTDEARAFA-EKNGLSFIETSALDSTNVEAAFQTI: 170
SecStr          :TTS S----S EEEEEEE  TTT    S HHHHHHHH-HHTT EEEE  SS  HHHHHHHHHH:    
ExpBur          :eebee----ebebbbbbbeeeeeeeeebeeeebeeeb-eeeeeebeebeeeeeeebeebbeeb:

Protein Model on 6ixv_F_1 (TEMPLATE: 6ixv )

Input Residue Numbers for Focused Sites