[pdbjlvh2]Protein Model on 4fmb_F

Protein Model on 4fmb_F_1 (TEMPLATE: 4fmb )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:3] [assembly_id:4]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(RAB7A_HUMAN)	F 1 (F)	polymer(polypeptide(L)) [170 aa]	Ras-related protein Rab-1A :RAB1A_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4fmb_F_1 identity=40.3%

queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :* *    *******  *            *  *** **       *      ***********       ****     * ***    *     *  *  :
4fmb_F_1       6:LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID: 105
SecStr          :EEEEEEE STTSSHHHHHHHHHTS   S S    S EEEEEEE SSS  EEEEEEE   SGGGHHHHHTTTTT SEEEEEEETT HHHHHTHHHHHHHHH:    
ExpBur          :ebbbbbbbbeebbbeebbbbbeeeeeeeeeeeeeeeeeeeeebebeeeebebebbbbbbeeeebeebbeebeebebbbbbbbbeeeebbebbeebbebbe:    

queryA       108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
                :  **    **      *** **    *              **  ***** * **** * * *:
4fmb_F_1     106:RYAS----ENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMA: 164
SecStr          :HHS ----TT EEEEEEE TT TTT  S HHHHHHHHHTTT  EEEEBTTTTBSHHHHHHHHH:    
ExpBur          :ebbe----eebbebbbbbebeeeeeeebeeeebeeebeeeebebbbbbbeeeeebeebbeebb:

Protein Model on 4fmb_F_1 (TEMPLATE: 4fmb )

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