Protein Model on 4fmd_F_1_P_1
(TEMPLATE: 
4fmd
)Protein Model on 4fmd_F_1_P_1
(TEMPLATE: 4fmd
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | F 1 (F) | polymer(polypeptide(L)) [149 aa] | Ras-related protein Rab-1A :RAB1A_HUMAN | |
| 2 | b | P 1 (F) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D 17S 18G 19V 20G 21K 22T(S) 23S(C) 33F(Y) 40T 125N 126K 128D 129L 155S 156A 157K (identity: 82.4 %/38.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4fmd_F_1 identity=38.2% |
queryA 10:KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQ: 109
:* ******* * *** ** ********** **** * *** * * * :
4fmd_F_1 1:KLLLIGDSGVGKSCLLLRFADDTYTXXXISTIGVDFKIRXXXXXXXXXXXXIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRY: 100
SecStr : EEEE TTSSHHHHHHHHHHS --- SEEE ------------ EEE SGGGHHHHHTTGGG SEEEEEEESS HHHHHTHHHHHHHHHHH:
ExpBur :ebbbbbbeebbbeebbbbeeeeeee---eebebeeeeee------------bebbbbeeeebeebbeebeebebbbbbbbbeeeebbebbeebbebbeee:
Contact : bbbbbbbb b b
queryA 110:ASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
:** ** *** ** * ** ***** * **** * * *:
4fmd_F_1 101:AS----ENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMA: 157
SecStr :S ----TT EEEEEEE TT TT S HHHHHHHHGGGT EEE BTTTTBTHHHHHHHHH:
ExpBur :be----eebbebbbbbebeeeeeeebeeeebeeebeeeebebbebbbeeeeebeebbeebe:
Contact : bb bb bbb
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[assembly_id:3]
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