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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | F 1 (DDD) | polymer(polypeptide(L)) [168 aa] | Ras-related protein Rab-5A :RAB5A_HUMAN | |
2 | b | G 1 (DDD) | non-polymer(GTP) | GUANOSINE-5'-TRIPHOSPHATE | 16D(E) 17S 18G(A) 19V 20G 21K 22T(S) 23S 33F 34S(H) 35N(E) 37Y(Q) 39A(S) 40T 65A 66G 125N 126K 128D 129L 155S 156A 157K (identity: 69.6 %/43.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7bl1_F_1 identity=43.0% |
queryA 9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108 : * ** * *** ** * * **** *** * ** * ****** ** ** **** * * * * * * : 7bl1_F_1 6:FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVSLDDTTVKFEIWDTAGLERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR: 105 SecStr :EEEEEE STTSSHHHHHHHHHHS TT SSEEEEEEEEEETTEEEEEEEEEE SGGGGGGHHHHHTT SEEEEEEETT HHHHHHHHHHHHHHHH: ExpBur :bebbbbbeeebbbbbbbbebbeeeeeeeeeebebeeeeeeebebeebebebebebbbbeeebeeebeeebeebebbbbbbbbeeeebbebbeebbebbee: Contact : bbbbbbbb bbb b bb bb queryA 109:QASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171 :**** * *** ** * * * ** * ***** ** * ** : 7bl1_F_1 106:QASP----NIVIALSGNKADLANKRAVDFQEAQSYA-DDNSLLFMETSAKTSMNVNEIFMAIAK: 164 SecStr :HS T----T EEEEEEE GGGGGG S HHHHHHHH-HTTT EEEE TTT TTHHHHHHHHHH: ExpBur :ebee----ebbbbbbbbebeeeeeeebeeeebbebb-eeeebebebbbbeeeeebeebbeebbe: Contact : bb bb bbb |