Protein Model on 6djl_F_1_E_1
(TEMPLATE: 
6djl
)Protein Model on 6djl_F_1_E_1
(TEMPLATE: 6djl
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DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | F 1 (F) | polymer(polypeptide(L)) [177 aa] | Ras-related protein Rab-11A :RB11A_HUMAN | |
| 2 | b | E 1 (E) | polymer(polypeptide(L)) [226 aa] | SH3 domain-binding protein 5 :3BP5_HUMAN | 8L 10K 32K(E) 33F 34S(N) 35N(L) 36Q(E) 39A(S) 40T 41I 45F 60Q 62W 69R 70F(Y) 72S(A) 76A 79R (identity: 61.1 %/42.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6djl_F_1 identity=42.0% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* ** ******* * * * *** * * ** ******* ** * **** ** * * * * :
6djl_F_1 14:LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR: 113
SecStr :EEEEEEESSTTS HHHHTTTTSEE SS TTTTS EEEEEEEETTEEEEEEEE SSS HHHHHHHSTT EEEEEEETT HHHHHHHHHHHHHHH:
ExpBur :ebbbbbbbeeebebbebbeebbeeeeeeebeeeebbebbbeebebeeeebbbebebbbeeeebeeebeebbeebebbbbbbbbbeeebbebbeebbeebe:
Contact :b b bbbbb bbb b b b bb b b b
queryA 108:IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169
: * * *** ** * * * * * ** **** *** *****:
6djl_F_1 114:DHADS----NIVIMLVGNKSDLRHLRAVPTDEARAFA-EKNGLSFIETSALDSTNVEAAFQTI: 171
SecStr :HHS T----T EEEEEEE SSS S HHHHHHHH-HHTT EEEEE SS SHHHHHHHHHH:
ExpBur :eebee----ebbbbbbbbeebeeeeeebebeebeebb-eeeebebebbeeeeeeebeebbeeb:
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[assembly_id:4]
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