Protein Model on 4iru_F_1_E_1
(TEMPLATE: 
4iru
)Protein Model on 4iru_F_1_E_1
(TEMPLATE: 4iru
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[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | F 1 (F) | polymer(polypeptide(L)) [170 aa] | Ras-related protein Rab-1A :RAB1A_HUMAN | |
| 2 | b | E 1 (E) | polymer(polypeptide(L)) [295 aa] | LepB :Q5ZSM7_LEGPH | 10K 18G 35N(E) 36Q(S) 37Y 38K(I) 39A(S) 40T 41I 42G 43A(V) 44D 45F 47T(I) 62W 67Q 68E 69R 70F 73L(I) 77F(Y) (identity: 61.9 %/40.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4iru_F_1 identity=40.3% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******* * * *** ** * *********** **** * *** * * * :
4iru_F_1 18:LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID: 117
SecStr :EEEEEEEE TTSSHHHHHHHHHSS S EEE SSSS EEEEEEE STT SHHHHTTTTT S EEEEEESS HHHHSSTTTTTTTTT:
ExpBur :ebebbbbbbeebbbebbbbbbbeeeeeeeeeebebbeeeeeebeeeeeebbbbbbbbbbbeebeeebbeebeebebbbbbbbbbeeebbeebeebbebbe:
Contact : b b bbbbbbbbbbb b b bbbb b b
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
: ** ** *** ** * ** ***** * **** * * *:
4iru_F_1 118:RYAS----ENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFUTUA: 176
SecStr :SSS ----TT EEEEEETTT SS S SSSTTHHHHTTT EE BTTTTBTSSSSSSSSS:
ExpBur :ebbe----eebeebbbbbebeeeeeeebeeeebeeebeeeebebbbbbbeeeeebeebbebbb:
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[assembly_id:3]
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