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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | E 2 (E) | polymer(polypeptide(L)) [167 aa] | Ras-related protein Rab-5A :RAB5A_HUMAN | |
2 | b | S 2 (E) | non-polymer(MG) | MAGNESIUM ION | 22T(S) 40T 63D (identity: 66.7 %/43.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1tu3_E_2 identity=43.7% |
queryA 9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108 : * ** * *** ** * * **** *** * ** * ********* ** **** * * * * * * : 1tu3_E_2 8:FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR: 107 SecStr :EEEEEE STTSSHHHHHHHHHH TT SEEEEEEEEE SS EEEEEEEEE SGGGGGGTHHHHTT SEEEEEEETT HHHHHHHHHHHHHHHH: ExpBur :bbbbbbbbeebbbbbbbbebbeeeeeeeeeebeeeeeeeeeeebeeeebebebebbbeeeebeeebeeebeebebbbbbbbbeeeebbebbeebbebbee: Contact : b b b queryA 109:QASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171 :**** * *** ** * * * ** * ***** ** * ** : 1tu3_E_2 108:QASP----NIVIALSGNKADLANKRAVDFQEAQSYA-DDNSLLFMETSAKTSMNVNEIFMAIAK: 166 SecStr :HS T----T EEEEEEE GGGTTS S HHHHHHHH-HHTT EEEE TTT TTHHHHHHHHHH: ExpBur :ebee----ebbbbbbbbebeeeeeeebeeeebeebb-eeeebebbbbbbeeeeebeebbbbbbe: |