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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | E 1 (E) | polymer(polypeptide(L)) [167 aa] | Ras-related protein Rab-5A :RAB5A_HUMAN | |
2 | b | J 2 (J) | polymer(polypeptide(L)) [53 aa] | Rab GTPase binding effector protein 1 :RABE1_HUMAN | 41I 42G 69R 70F(Y) 73L 77F(Y) (identity: 66.7 %/43.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1tu3_E_1 identity=43.7% |
queryA 9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108 : * ** * *** ** * * **** *** * ** * ********* ** **** * * * * * * : 1tu3_E_1 8:FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR: 107 SecStr :EEEEEE STTSSHHHHHHHHHH TT SEEEEEEEEE SS EEEEEEEEE SGGGGGGTHHHHTT SEEEEEEETT HHHHHHHHHHHHHHHH: ExpBur :bbbbbbbbeebbbbbbbbebbeeeeeeeeeebeeeeeeeeeeebeeeebebebebbbeeeebeeebeeebeebebbbbbbbbeeeebbebbeebbebbee: Contact : bb bb b b queryA 109:QASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171 :**** * *** ** * * * ** * ***** ** * ** : 1tu3_E_1 108:QASP----NIVIALSGNKADLANKRAVDFQEAQSYA-DDNSLLFMETSAKTSMNVNEIFMAIAK: 166 SecStr :HS T----T EEEEEEE GGGTTS S HHHHHHHH-HHTT EEEE TTT TTHHHHHHHHHH: ExpBur :ebee----ebbbbbbbbebeeeeeeebeeeebeebb-eeeebebbbbbbeeeeebeebbbbbbe: |