[pdbjlvh2]Protein Model on 2efe_D

Protein Model on 2efe_D_1 (TEMPLATE: 2efe )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(RAB7A_HUMAN)	D 1 (D)	polymer(polypeptide(L)) [165 aa]	Small GTP-binding protein-like :Q9SN68_ARATH

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2efe_D_1 identity=42.7%

queryA        10:KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQ: 109
                :*   *** * ** **    *   *      **** *      * *  *   *********  **    ****     *****    *     *  *   *:
2efe_D_1      14:KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQ: 113
SecStr          :EEEEE  TTS HHHHHHHHHH   TTTS   S  SEEEEEEE SS EEEEEEEE   SGGGGGGTHHHHTT SEEEEEEETT HHHHHHHHHHHHHHHHH:    
ExpBur          :bbbbbbeeebbbeebbbbbbeebbeeeeeeeeebeebeeebeeeeeebebebebbebeeeebeebeeebeebebbbbbbbbbeeebbebbbebbebbeee:    

queryA       110:ASPRDPENFPFVVLGNKID-LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171
                :  *    *      *** * *  * *    **      *     ***** * **   *  ***:
2efe_D_1     114:GNP----NMVMALAGNKSDLLDARKVTAEDAQTYA-QENGLFFMETSAKTATNVKEIFYEIAR: 171
SecStr          :S T----T EEEEEEE TT  TT  S HHHHHHHH-HHTT EEEE  SSS TTHHHHHHHHHH:    
ExpBur          :bee----ebbbbbbbbebeeeeeeebeeeebeebb-eeeebbbbebbbeeeeebeebbeebbe:

Protein Model on 2efe_D_1 (TEMPLATE: 2efe )

Input Residue Numbers for Focused Sites