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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [164 aa] | Ras-related protein Rab-5A :RAB5A_HUMAN | |
2 | b | T 1 (D) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D(E) 17S 18G(A) 19V 20G 21K 22T(S) 23S 125N 126K 128D 129L 155S 156A 157K (identity: 80.0 %/43.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1tu4_D_1 identity=43.7% |
queryA 9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108 : * ** * *** ** * * **** *** * ** * ********* ** **** * * * * * * : 1tu4_D_1 8:FKLVLLGESAVGKSSLVLRFVKGQFHEXXXSTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPUYYRGAQAAIVVYDITNEESFARAKNWVKELQR: 107 SecStr :EEEEEEE TTSSHHHHHHHHS S --- BTTEEEEEEEEEETTEEEEEEEEEE SGGGGGGTHHHHTT SEEEEEEETT HHHHHHHHHHHHHHHH: ExpBur :bebbbbbbeebbbeebbeebbeeeeee---eeebbeebbbeeebeeeebebebbbbeeeeeebeebeebbeebebbbbbbbbeeeebbeebeebbeebee: Contact : bbbbbbbb queryA 109:QASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171 :**** * *** ** * * * ** * ***** ** * ** : 1tu4_D_1 108:QASP----NIVIALSGNKADLANKRAVDFQEAQSYA-DDNSLLFUETSAKTSUNVNEIFUAIAK: 166 SecStr :HS T----T EEEEEEE GGGGGG S HHHHHHHH-HHHT EEEE BTTTTBTHHHHHHHHHH: ExpBur :ebee----ebbbbbbbbebeeeeeeebeeeebeebb-eeeebebebbbbeeeeebeebbeebbe: Contact : bb bb bbb |