[pdbjlvh2]Protein Model on 1vg9_D_1_O

Protein Model on 1vg9_D_1_O_1 (TEMPLATE: 1vg9 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RAB7A_HUMAN)	D 1 (D)	polymer(polypeptide(L)) [173 aa]	Ras-related protein Rab-7 :RAB7_RAT
2	b		O 1 (D)	non-polymer(GDP)	GUANOSINE-5'-DIPHOSPHATE	16D 17S 18G 19V 20G 21K 22T 23S 33F 125N 126K 128D 129L 155S 156A 157K (identity: 100.0 %/98.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1vg9_D_1 identity=98.3%

queryA         6:KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDE: 105
                :********************************   *****************************************************************:
1vg9_D_1       6:KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYXXXIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDE: 105
SecStr          :  EEEEEEE  TTSSHHHHHHHHHH       ---    EEEEEEEETTEEEEEEEE  TTGGGGT   HHHHTT SEEEEEEETTBHHHHHTHHHHHHH:    
ExpBur          :ebebbbbbbbbeebbbeebbebbbeeeeeeee---eeeeeeeeebebeeeebebbbebbeeebeeeebeeebbeebbbbbbbbbbeeeebbeebeebbee:    
Contact         :          bbbbbbbb         b                                                                        

queryA       106:FLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVE: 181
                :****************************************************************************:
1vg9_D_1     106:FLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVE: 181
SecStr          :HHHHH  SSGGG  EEEEEE TTSS   S HHHHHHHHHHTT   EEE BTTTTBSHHHHHHHHHHHHHHHHHHH :    
ExpBur          :bbeebebeeeeebbbbbbbbeeeeeeeebeeeebeebbeeeeebebbbbbbeeeeebeebbebbbeebbebbeeee:    
Contact         :                   bb bb                         bbb

Protein Model on 1vg9_D_1_O_1 (TEMPLATE: 1vg9 )

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