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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [171 aa] | Ras-related protein Rab-1A :RAB1A_HUMAN | |
2 | b | M 1 (D) | non-polymer(MG) | MAGNESIUM ION | 22T(S) 40T 63D (identity: 66.7 %/40.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4fmd_D_1 identity=40.3% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107 :* * ******* * * *** ** * *********** **** * *** * * * : 4fmd_D_1 6:LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID: 105 SecStr : EEEEEE TTSSHHHHHHHHHHS S SEEEEEEEEEETTEEEEEEEEEE SGGGHHHHHTTSTT SEEEEEEETT HHHHHHHHHHHHHHH: ExpBur :ebebbbbbeeebbbeebbbbbbeeeeeeeeeeeebeeeeeeebebeeeebebbbebbbbeeeebeebbeebeebebbbbbbbbeeeebbeebeebbebbe: Contact : b b b queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170 : ** ** *** ** * ** ***** * **** * * *: 4fmd_D_1 106:RYAS----ENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMA: 164 SecStr :HHS ----TT EEEEEEE TT TTS S HHHHHHHHHHHT EEE TTT TTHHHHHHHHH: ExpBur :eebe----eebbebbbbbebeeeeeeebeeeebeeebeeeebebbbbbbeeeeebeebbbebb: |