Protein Model on 4fmd_D_1_L_1
(TEMPLATE: 
4fmd
)Protein Model on 4fmd_D_1_L_1
(TEMPLATE: 4fmd
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [171 aa] | Ras-related protein Rab-1A :RAB1A_HUMAN | |
| 2 | b | L 1 (D) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D 18G 19V 20G 21K 22T(S) 23S(C) 33F(Y) 35N(E) 125N 126K 128D 129L 155S 156A 157K (identity: 75.0 %/40.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4fmd_D_1 identity=40.3% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******* * * *** ** * *********** **** * *** * * * :
4fmd_D_1 6:LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID: 105
SecStr : EEEEEE TTSSHHHHHHHHHHS S SEEEEEEEEEETTEEEEEEEEEE SGGGHHHHHTTSTT SEEEEEEETT HHHHHHHHHHHHHHH:
ExpBur :ebebbbbbeeebbbeebbbbbbeeeeeeeeeeeebeeeeeeebebeeeebebbbebbbbeeeebeebbeebeebebbbbbbbbeeeebbeebeebbebbe:
Contact : b bbbbbb b b
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
: ** ** *** ** * ** ***** * **** * * *:
4fmd_D_1 106:RYAS----ENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMA: 164
SecStr :HHS ----TT EEEEEEE TT TTS S HHHHHHHHHHHT EEE TTT TTHHHHHHHHH:
ExpBur :eebe----eebbebbbbbebeeeeeeebeeeebeeebeeeebebbbbbbeeeeebeebbbebb:
Contact : bb bb bbb
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[assembly_id:2]
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