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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [158 aa] | Ras-related protein Rab-2A :RAB2A_HUMAN | |
2 | b | L 1 (D) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D 17S(T) 18G 19V 20G 21K 22T(S) 23S(C) 125N 126K 129L 155S 156A 157K (identity: 78.6 %/38.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1z0a_D_1 identity=38.8% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107 :* * ** ** **** * * *** * * ********* * * **** ** * * ** * * : 1z0a_D_1 10:LFKYIIIGDTGVGKSCLLLQFTDXXXXXXXXLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLED--: 107 SecStr :EEEEEEE STTSSHHHHHHHHH -------- SEEEEEEEEEEETTEEEEEEEEEEET SSGGG HHHHTTEEEEEEEEETT THHHHTHHHHHHH--: ExpBur :ebbbbbbbbeebbbeebbebbee--------eeeeeeebeeebebeeeebebebbbbbebeebeebeeebbeebebbbbbbbbbeeebeebbeebeeb--: Contact : bbbbbbbb queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171 : * * *** *** * * ***** * *** ** * : 1z0a_D_1 108:--ARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREXXLIFMETSAKTASNVEEAFINTAK: 169 SecStr :--HHHSS TTSEEEEEEE TT GGG S HHHHHHHHH -- EEEEEBTTTTBTHHHHHHHHHH: ExpBur :--beeebeeebbbbbbbbbeeeeeeeebeeebbeebbee--eeebebbbeeeeebebbbeebbe: Contact : bb b bbb |