Protein Model on 6hdu_D_1_K_1
(TEMPLATE: 
6hdu
)Protein Model on 6hdu_D_1_K_1
(TEMPLATE: 6hdu
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DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [173 aa] | Ras-related protein Rab-38 :RAB38_HUMAN | |
| 2 | b | K 1 (D) | non-polymer(GTP) | GUANOSINE-5'-TRIPHOSPHATE | 17S(L) 18G 19V 20G 21K 22T 23S 33F 34S 35N(S) 37Y 38K(R) 39A 40T 65A 66G 125N 126K 128D 155S 156A 157K (identity: 86.4 %/36.8 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6hdu_D_1 identity=36.8% |
queryA 4:RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSW: 102
: * * * ** ****** ** ** * **** ** * * * * ** ** *** ** * ***** * ** *:
6hdu_D_1 8:HKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDIAGLERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKW: 107
SecStr : EEEEEEEEEE STTSSHHHHHHHHHHS SS SEEEEEEEEEEETTEEEEEEEEEE GGGGGSS HHHHHTT EEEEEEETT HHHHHHHHHH:
ExpBur :eeebebbbbbbbbeebbbeebbebbbeeeeeeeeeebeebeebebebeeeeebbbebebbbbbbebeeeeebeebbeebbbbbbbbbeeeeebbebbbeb:
Contact : bbbbbbb bbb bbbb bb
queryA 103:RDEFLIQASPRDPENFPFVVLGNKID--LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE: 177
: * * * ** * * ******* ** * * *:
6hdu_D_1 108:KNDLDSKLSLPNGKPVSVVLLANKCDQXXXXXXXXXXKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE: 184
SecStr :HHHHHHH TTS EEEEEEE TT ---------- HHHHHHHHT SEEEE BTTTTBSHHHHHHHHHHHHHHT :
ExpBur :bebbeeebebeeeeebbbbbbbbeeee----------ebeebbeeeebeeeeebbbeeeeebeebbebbbeebeeee:
Contact : bb bb bbb
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[assembly_id:4]
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