CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [171 aa] | Ras-related protein Rab-1A :RAB1A_HUMAN | |
2 | b | K 1 (D) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D 17S 18G 19V 20G 21K 22T(S) 23S(C) 33F(Y) 35N(E) 125N 126K 128D 129L 155S 156A 157K (identity: 76.5 %/40.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4fmb_D_1 identity=40.3% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107 :* * ******* * * *** ** * *********** **** * *** * * * : 4fmb_D_1 6:LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID: 105 SecStr :EEEEEEE STTSSHHHHHHHHHTS S S S EEEEEEE SSS EEEEEEE SGGGHHHHHTTTTT SEEEEEEETT HHHHHTHHHHHHHHH: ExpBur :ebbbbbbbbeebbbeebbbbbeeeeeeeeeeeeeeeeeeeeebebeeeebebebbbbbbeeeebeebbeebeebebbbbbbbbeeeebbebbeebbebbe: Contact : bbbbbbbb b b queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170 : ** ** *** ** * ** ***** * **** * * *: 4fmb_D_1 106:RYAS----ENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMA: 164 SecStr :HHS ----TT EEEEEEE TT TTT S HHHHHHHHHTTT EEEEBTTTTBSHHHHHHHHH: ExpBur :ebbe----eebbebbbbbebeeeeeeebeeeebeeebeeeebebbbbbbeeeeebeebbeebb: Contact : bb bb bbb |