Protein Model on 8a4b_D_1_G_1
(TEMPLATE: 
8a4b
)Protein Model on 8a4b_D_1_G_1
(TEMPLATE: 8a4b
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DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [169 aa] | Ras-related protein Rab-3B :RAB3B_HUMAN | |
| 2 | b | G 1 (D) | non-polymer(GTP) | GUANOSINE-5'-TRIPHOSPHATE | 17S 18G(S) 19V 20G 21K 22T 23S 33F 34S(T) 35N(P) 37Y(F) 39A(S) 40T 64T 65A 66G 125N 126K 128D 129L(M) 155S 156A 157K (identity: 73.9 %/35.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8a4b_D_1 identity=35.4% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
: * * * * ***** * * * * ** * * * ******* ** * **** * * * * * :
8a4b_D_1 6:MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGLERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWA----: 101
SecStr :EEEEEEEESTTSSHHHHHHHHHHS SSEEEEEEEEEETTEEEEEEEEEE SGGGHHHHHHTTTT EEEEEEETT HHHHHTHHHHH----:
ExpBur :ebbbbbbbbeebbbeebbebbeeeeeeeeeeebebbeeeeeebeeeeeebebebbbbbbeeeeeeebbeebeebebbbbbbbbeeeebbebbeebb----:
Contact : bbbbbbb bbb b bb bbb
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169
: * * *** * * * ** **** * * *** :
8a4b_D_1 102:TQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERL: 163
SecStr :HHHHHH SS EEEEEEE TT GGG S HHHHHHHHHHHT EEEE BTTTTBSHHHHHHHH:
ExpBur :ebbeeebeeebebbbbbbebeeeeebebeeeebeebbeeeebebbbbbbeeeeebeebbeeb:
Contact : bb bb bbb
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[assembly_id:2]
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