[pdbjlvh2]Protein Model on 6ekk_C

Protein Model on 6ekk_C_1 (TEMPLATE: 6ekk )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(RAB7A_HUMAN)	C 1 (C)	polymer(polypeptide(L)) [176 aa]	Ras-related protein Rab-35 :RAB35_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6ekk_C_1 identity=38.7%

queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :* *  * ******* **        **  *  *** **    *      *  ***********       ***      * ***    *     *  *  :
6ekk_C_1       6:LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI-: 104
SecStr          :EEEEEEE  TTSSHHHHHHHH   SS    HHHHSEEEEEEEEEETTEEEEEEEEEETTGGG SS  GGGGTT SEEEEEEETT HHHHHHHHHHHHHH-:    
ExpBur          :ebebbbbbbeebbbeebbeebeeeeeeeeebeeeeebebbbeeebeeebbebbbebeeebeeeeebeeeebeebebbbbbbbbeeeebbebbeebbeeb-:    

queryA       108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK: 175
                :                *** *   * *              *  *******  ***  *  *    * :
6ekk_C_1     105:----NQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLR: 168
SecStr          :----HHH TTSEEEEEEE    GGG  S HHHHHHHHHHHT  EEE BTTTTBSHHHHHHHHHHHHHH:    
ExpBur          :----eeebeebbbbbbbbeeeeeeebebeeeebeebbeebebebbbbbbeeeeebeebbebbbeebbb:

Protein Model on 6ekk_C_1 (TEMPLATE: 6ekk )

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