[pdbjlvh2]Protein Model on 3bc1_C

Protein Model on 3bc1_C_1 (TEMPLATE: 3bc1 )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(RAB7A_HUMAN)	C 1 (E)	polymer(polypeptide(L)) [175 aa]	Ras-related protein Rab-27A :RB27A_MOUSE

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3bc1_C_1 identity=39.6%

queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMV----------DDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFK:  97
                :* *   **********   **   **      * * **  * *                   * ***** *** **  ** * *    * ** *    * :
3bc1_C_1      11:LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRAXXXXXXXXXGQRIHLQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFL: 110
SecStr          :EEEEEEE STTSSHHHHHHHHHHS    S     SEEEEEEEEEE  --------- EEEEEEEEEE  SGGGHHHHHHGGGG SEEEEEEETT HHHHH:    
ExpBur          :ebebbbbbbeebbbeebbebbbeeeeeeeeeebebeeeeeeebebee---------ebebbbbbbbbbbeeebeeebbebbeebebbbbbbbbbeeebbe:    

queryA        98:TLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169
                :    *       *    *     *  *** ***               *  ********    *   *    :
3bc1_C_1     111:NVRNWISQLQMHAYSENPD---IVLCGNKSDLEDQRAVKEEEARELAEKYGIPYFETSAANGTNISHAIEML: 179
SecStr          :THHHHHHHHHHHSSSSS E---EEEEEE TT GGG  S HHHHHHHHHHHT  EEE  TTT TTHHHHHHHH:    
ExpBur          :ebeebbeebeeebeeeebb---bbbbbbeeeeeeeeebeeeebeebbeeeebebebbbbeeeeebeebbeeb:

Protein Model on 3bc1_C_1 (TEMPLATE: 3bc1 )

Input Residue Numbers for Focused Sites