[pdbjlvh2]Protein Model on 1z0k_C

Protein Model on 1z0k_C_1 (TEMPLATE: 1z0k )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(RAB7A_HUMAN)	C 1 (C)	polymer(polypeptide(L)) [168 aa]	GTP-binding protein :RAB4A_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1z0k_C_1 identity=38.4%

queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :* *    *  * **  *  *   ***      ***  *  *   *    *  ******* *** *     ****    ** * *   *   *  *    *:
1z0k_C_1       8:LFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGLERFRSVTRSYYRGAAGALLVYDITSRETYNALTNW----L: 103
SecStr          :EEEEEEEESTTSSHHHHHHHHHHSS  SS    SSEEEEEEEEEETTEEEEEEEEEE  SGGGHHHHHTTTTT  EEEEEEETT HHHHHTHHHH----H:    
ExpBur          :ebebbbbbbeebbbbbbbebbeeeeeeeeeeebebbeebebebebeebebebebebbbbeeebeeebeeebeebebbbbbbbbbeeebbebbeeb----b:    

queryA       108:IQASPRDPENFPFVVLGNKIDLE-NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ: 176
                :  *      *      *** **   * *    *       *     ****     ** **   **  *  :
1z0k_C_1     104:TDARMLASQNIVIILCGNKKDLDADREVTFLEASRFA-QENELMFLETSALTGEDVEEAFVQCARKILNK: 172
SecStr          :HHHHHHT TT EEEEEEE GGGGGG  S HHHHHHHH-HHTT EEEEE TTT TTHHHHHHHHHHHHHH :    
ExpBur          :ebbeeebeeebbbbbbbbeeeeeeeeebeeeebeebb-eebebbbebbbbeeeeebeebbbebbeebeee:

Protein Model on 1z0k_C_1 (TEMPLATE: 1z0k )

Input Residue Numbers for Focused Sites