[pdbjlvh2]Protein Model on 1vg8_C

Protein Model on 1vg8_C_1 (TEMPLATE: 1vg8 )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:3]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(RAB7A_HUMAN)	C 1 (C)	polymer(polypeptide(L)) [178 aa]	Ras-related protein Rab-7 :RAB7_RAT

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1vg8_C_1 identity=100.0%

queryA         7:VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEF: 106
                :****************************************************************************************************:
1vg8_C_1       7:VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEF: 106
SecStr          : EEEEEEEE TTSSHHHHHHHHHHS   SS     S EEEEEEEEETTEEEEEEEEE  SSGGG  S  GGGTT SEEEEEEETT HHHHHTHHHHHHHH:    
ExpBur          :eebbbbbbbbeebbbeebbebbbeeeeeeeeebeebeeeeeeebebeeeebebbbbbbbbeeeeeeeeeebbeebbbbbbbbbbbbeebbeebeebbeeb:    

queryA       107:LIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYN: 184
                :******************************************************************************:
1vg8_C_1     107:LIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYN: 184
SecStr          :HHHH  SSGGGS EEEEEE TTSS   S HHHHHHHHHHTTS  EEE BTTTTBSHHHHHHHHHHHHHHHHHHHHHH :    
ExpBur          :beebeeeeeeebbbbbbbbeeeeeeeebeeeebeebbeebeebebbbbbbeeeeebeebbebbbebbbebbeeeeeee:

Protein Model on 1vg8_C_1 (TEMPLATE: 1vg8 )

Input Residue Numbers for Focused Sites