Protein Model on 3bbp_C_2_K_2 (TEMPLATE: 3bbp )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) C 2 (C) polymer(polypeptide(L)) [161 aa] Ras-related protein Rab-6A :RAB6A_HUMAN
2 b K 2 (C) non-polymer(MG) MAGNESIUM ION 21K 22T 40T 63D 64T (identity: 100.0 %/39.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3bbp_C_2 identity=39.5%
queryA         9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108
                : *   **   ******        * * * **** *** *     ** *  * ***** *** **     *     * * * *  * *     * *    :
3bbp_C_2      17:FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRT: 116
SecStr          : EEEEEESTTSSHHHHHHHHHTS    S     SEEEEEEEEE SSSEEEEEEEEE  SSGGGTTHHHHHTT SEEEEEEETT HHHHHTHHHHHHHHHH:    
ExpBur          :ebbbbbbbeebbbeebbebebeeeeeeeeeebebbeeeeeeeebeeeebebebbbbbbbeeebeebeeebeebebbbbbbbbeeeebbeebeebbeebee:    
Contact         :            bb                 b                      bb                                            

queryA       109:QASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
                :               *** **   ***             *    *****   ** * *   *:
3bbp_C_2     117:ERGS----DVIIMLVGNKTDLADKRQVSIEEGERKA-KELNVMFIETSAKAGYNVKQLFRRVA: 174
SecStr          :HHTT----SSEEEEEEE GGG TT  S HHHHHHHH-HHTT EEEE BTTTTBTHHHHHHHHH:    
ExpBur          :eeee----ebebbbbbbebeeeeeeebeeeebeebb-eeeebebbbbbbeeeeebeebbeebb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123