Protein Model on 1tu3_C_1_H_1 (TEMPLATE: 1tu3 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) C 1 (C) polymer(polypeptide(L)) [166 aa] Ras-related protein Rab-5A :RAB5A_HUMAN
2 b H 1 (H) polymer(polypeptide(L)) [44 aa] Rab GTPase binding effector protein 1 :RABE1_HUMAN 30N(K) 43A 44D(A) 45F 46L 47T 62W 73L 76A(M) 77F(Y) (identity: 60.0 %/43.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1tu3_C_1 identity=43.7%
queryA         9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108
                : *   ** * *** **    *   *      **** ***  *  **  *   *********  **    ****     * * *    *     *  *   :
1tu3_C_1       8:FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR: 107
SecStr          :EEEEEE STTSSHHHHHHHHHT    TT    SSEEEE  EEE SSSEEEEEEEEE  SGGGGGGTHHHHTT SEEEEEEETT HHHHHHHHHHHHHHHH:    
ExpBur          :bbbbbbbbeebbbbbbbbebeeeeeeeeeeebeeeeeeeeebeeeeeebebebebbbbeeebeeebeeebeebebbbbbbbbeeeebbebbeebbebbee:    
Contact         :                     b            bbbbb              b          b  bb                               

queryA       109:QASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171
                :****    *      *** ** * * *    **      *     *****   **   *  ** :
1tu3_C_1     108:QASP----NIVIALSGNKADLANKRAVDFQEAQSYA-DDNSLLFMETSAKTSMNVNEIFMAIAK: 166
SecStr          :HS T----T EEEEEEE TT TTS  S HHHHHHHH-HHTT   EE BTTTTBTHHHHHHHHHH:    
ExpBur          :ebee----ebbbbbbbbebeeeeeeebeeeebeebb-eeeebebbbbbbeeeeebeebbbbbbe:    


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