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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [166 aa] | Ras-related protein Rab-5A :RAB5A_HUMAN | |
2 | b | H 1 (H) | polymer(polypeptide(L)) [44 aa] | Rab GTPase binding effector protein 1 :RABE1_HUMAN | 30N(K) 43A 44D(A) 45F 46L 47T 62W 73L 76A(M) 77F(Y) (identity: 60.0 %/43.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1tu3_C_1 identity=43.7% |
queryA 9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108 : * ** * *** ** * * **** *** * ** * ********* ** **** * * * * * * : 1tu3_C_1 8:FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR: 107 SecStr :EEEEEE STTSSHHHHHHHHHT TT SSEEEE EEE SSSEEEEEEEEE SGGGGGGTHHHHTT SEEEEEEETT HHHHHHHHHHHHHHHH: ExpBur :bbbbbbbbeebbbbbbbbebeeeeeeeeeeebeeeeeeeeebeeeeeebebebebbbbeeebeeebeeebeebebbbbbbbbeeeebbebbeebbebbee: Contact : b bbbbb b b bb queryA 109:QASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171 :**** * *** ** * * * ** * ***** ** * ** : 1tu3_C_1 108:QASP----NIVIALSGNKADLANKRAVDFQEAQSYA-DDNSLLFMETSAKTSMNVNEIFMAIAK: 166 SecStr :HS T----T EEEEEEE TT TTS S HHHHHHHH-HHTT EE BTTTTBTHHHHHHHHHH: ExpBur :ebee----ebbbbbbbbebeeeeeeebeeeebeebb-eeeebebbbbbbeeeeebeebbbbbbe: |