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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [169 aa] | Ras-related protein Rab-5A :RAB5A_HUMAN | |
2 | b | D 2 (D) | polymer(polypeptide(L)) [164 aa] | Ras-related protein Rab-5A :RAB5A_HUMAN | 9L(F) 10K 38K(E) 60Q(E) 62W 79R 80G 112P 117N (identity: 66.7 %/43.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1tu4_C_1 identity=43.7% |
queryA 9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108 : * ** * *** ** * * **** *** * ** * ********* ** **** * * * * * * : 1tu4_C_1 8:FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPUYYRGAQAAIVVYDITNEESFARAKNWVKELQR: 107 SecStr :EEEEEESSTTSSHHHHHHHHHHTSEE EE GGG EEEEEEE TTSSEEEEEEEESSGGGTS HHHHTT EEEEEEETT HHHHHHHHHHHHHHHH: ExpBur :bbbbbbbeeebbbeebbeebbeebeeeeeeeeeeeebebbbbebeeeebebebbbbeeebeeeebeeebbeebebbbbbbbbeeeebbeebeebbeebee: Contact :bb b b b bb queryA 109:QASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171 :**** * *** ** * * * ** * ***** ** * ** : 1tu4_C_1 108:QASP----NIVIALSGNKADLANKRAVDFQEAQSYA-DDNSLLFUETSAKTSUNVNEIFUAIAK: 166 SecStr :HS T----T EEEEEEE GGGGGG S HHHHHHHH-HTTT EEEE TTT TTHHHHHHHHHH: ExpBur :ebbe----ebbbbbbbbebeeeeeeebeeeebeebb-eeeebebebbbbeeeeebeebbeebbe: Contact : b b |