Protein Model on 1ibr_C_1_D_1
(TEMPLATE: 
1ibr
)Protein Model on 1ibr_C_1_D_1
(TEMPLATE: 1ibr
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [169 aa] | GTP-binding nuclear protein RAN :RAN_HUMAN | |
| 2 | b | D 1 (D) | polymer(polypeptide(L)) [438 aa] | Importin beta-1 subunit :IMB1_HUMAN | 62W 68E 72S(G) 73L 75V(D) 76A(G) 77F(Y) 79R(I) 80G(Q) 101S(N) 102W 104D(R) 105E(D) 113R 114D(V) 116E 144Y(H) 145S(R) 146K 147N(K) 148N 149I(L) 150P(Q) 151Y 152F(Y) 161N 164Q(K) (identity: 37.0 %/34.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1ibr_C_1 identity=34.2% |
queryA 7:VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEF: 106
:* * ** * *** * * ** * ******* * * * * * **** * * * :
1ibr_C_1 9:VQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL: 108
SecStr : EEEEEEEESTTSSHHHHHHHHHTS S SEEEEEEEE TTS EEEEEEEE SGGG TTGGGGGTT EEEEEEETT HHHHHTHHHHHHHH:
ExpBur :eebbbbbbbbeebbbebbbebbeeeeeeeeeebbebeeebebebebeeeebebbbebbbbeeeebeeeeebbeebebbbbbbbbeeeebbeebeebbeeb:
Contact : b b bb bbb bb bb bb
queryA 107:LIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL: 174
: * ** * * *** * * * * * * * *** * * * ** :
1ibr_C_1 109:V-----RVCENIPIVLCGNKVDIKDRKVKAKSIV--FHRKKNLQYYDISAKSNYNFEKPFLWLARKLI: 169
SecStr :H-----TT SS EEEEEE TTSSS SS GGG --HHHHHT EEEE TTT TTTTHHHHHHHHHHH:
ExpBur :e-----eebeebbbbbbbbebeeeebebeeeebe--beeeeebebbebbbeeeeeeeebbbebbeeee:
Contact : bb b bbbbbbbbb b b
|
[assembly_id:2]
[help]