[pdbjlvh2]Protein Model on 8fo8_B

Protein Model on 8fo8_B_1 (TEMPLATE: 8fo8 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(RAB7A_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [172 aa]	Ras-related protein Rab-7L1 :RAB7L_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8fo8_B_1 identity=38.0%

queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDD-RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEF: 106
                :* **   **  ******   *    **  ** * * **  *     *   *  * ** ** ***       ** *  **  ****   **     *    :
8fo8_B_1       7:LFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWDIAGLERFAAMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDL: 106
SecStr          :EEEEEEE  TTS HHHHHHHHTT   S       S EEEEEEEEEETTEEEEEEEEE   TTSSS   HHHHTT  EEEEEEETT HHHHHHHHHHHHHH:    
ExpBur          :eebbbbbbbeebbbebbbebeeeeebeeeeeebeeeeebebebeeeeebebbbebebbbbeeeeeeeeeeebeeeebbbbbbbbeeeebeebbeebeeeb:    

queryA       107:LIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNN--IPYFETSAKEAINVEQAFQTIARNALK: 175
                :         *  *   * ** **     *  * *    ** *      *** **  *   *          :
8fo8_B_1     107:DSKLTLPNGEPVPCLLLANKCDLS--PWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMR: 175
SecStr          :HHS   SS S    EEEEE  SSS--SSSS HHHHHHHHHHTT SEEEE  TTTTSSHHHHHHHHHHHHHH:    
ExpBur          :eebeebeeeeeeebbbbbbebeee--eeeeeeeeeeebbeebebebeeebbbeeeeebeebbbebbbbbee:

Protein Model on 8fo8_B_1 (TEMPLATE: 8fo8 )

Input Residue Numbers for Focused Sites