Protein Model on 5xr7_B_1 (TEMPLATE: 5xr7 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description
1 a A(RAB7A_HUMAN) B 1 (B) polymer(polypeptide(L)) [166 aa] Ras-related protein RABA1a :RAA1A_ARATH
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5xr7_B_1 identity=40.1%
queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :* *    *******  *        *    * ***  * **   *    *  *******         * ****    *  ***   **     *  *  :
5xr7_B_1      25:LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGKXXXRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELR: 124
SecStr          :EEEEEEE STTSSHHHHHHHHHTS   SS     SEEEEEEEEESSSSEEEEEEEEE   --- TTHHHHHTT  EEEEEEETT HHHHHTHHHHHHHHH:    
ExpBur          :ebbbbbbbbeebbbbbbbbbbeeeeeeeeeeebeeeeebeeebebeeeebebebbbbebe---eeeeeebbeebebbbbbbbbbeeebbeebbebbeebe:    

queryA       108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYF-ETSAKEAINVEQAFQTI: 169
                :    *    *      *** **    ** *   *         ** ****  * *** **   :
5xr7_B_1     125:GHTDP----NIVVMLIGNKCDLRH-LVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEV: 182
SecStr          :TTS T----T EEEEEEE TT GG-G  S HHHHHHHHHHHT EEEEE SSS TTHHHHHHHH:    
ExpBur          :eebee----ebbbbbbbbeeeeee-eeebeeeebeebbeeeebeeeebbbeeeeebeebbeeb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123