Protein Model on 7opq_B_1_O_1 (TEMPLATE: 7opq )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) B 1 (B) polymer(polypeptide(L)) [204 aa] Synaptotagmin-like protein 2,Ras-related protein Rab-27A :SYTL2_HUMAN:RB27A_HUMAN
2 b O 1 (B) non-polymer(GOL) GLYCEROL 16D 71Q(R) 98T(N) 101S(N) 102W (identity: 40.0 %/40.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7opq_B_1 identity=40.9%
queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM----------VDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFK:  97
                :* *   **********   **   **      * * **  * *                   * ***** *** **  ** * *    * ** *    * :
7opq_B_1      46:LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASXXXXXXXRGQRIHLQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFL: 145
SecStr          :EEEEEEE STTSSHHHHHHHHHHS    S     SEEEEEEEEEEE  ------- EEEEEEEEEEE  SGGGHHHHHHHHTT SEEEEEEETT HHHHH:    
ExpBur          :bbbbbbbbbeebbbeebbebbbeeeeeeeeeebebbebeeeebebeee-------eeeebbbbbbbbbbeeebeeebbebbeebebbbbbbbbeeeebbe:    
Contact         :        b                                                                b                          

queryA        98:TLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169
                :    *       *    *     *  *** ***   *           *  ********    *  **    :
7opq_B_1     146:NVRNWISQLQMHAYSENPD---IVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEML: 214
SecStr          :THHHHHHHHHHHSSSSS  ---EEEEEE TT GGG  S HHHHHHHHHHHT  EEE  TTT TTHHHHHHHH:    
ExpBur          :ebeebbeebeeebeeeebb---bbbbbbeeeeeeeeebeeeebeebbeeeebebbbbbbeeeeebeebbeeb:    
Contact         :b  bb                                                                                               


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