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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [166 aa] | Ras-related protein Rab-5A :RAB5A_HUMAN | |
2 | b | N 1 (B) | non-polymer(GNP) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 17S 18G(A) 19V 20G 21K 22T(S) 23S 33F 34S(H) 35N(E) 36Q(F) 37Y(Q) 38K(E) 39A(S) 40T 66G 125N 126K 128D 129L 155S 156A 157K (identity: 65.2 %/43.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1tu3_B_1 identity=43.7% |
queryA 9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108 : * ** * *** ** * * **** *** * ** * ********* ** **** * * * * * * : 1tu3_B_1 8:FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR: 107 SecStr :EEEEEE STTSSHHHHHHHHHH TT SSEEEEEEEEE SSSEEEEEEEEE SGGGGGGTHHHHTT SEEEEEEETT SHHHHHHHHHHHHHHH: ExpBur :bbbbbbbeeebbbbbbbbebbeeeeeeeeeebeeeeeeeeebeeeeeebebebebbbbeeebeeebeeebeebebbbbbbbbeeeebbebbeebbebbee: Contact : bbbbbbb bbbbbbbb b queryA 109:QASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171 :**** * *** ** * * * ** * ***** ** * ** : 1tu3_B_1 108:QASP----NIVIALSGNKADLANKRAVDFQEAQSYA-DDNSLLFMETSAKTSMNVNEIFMAIAK: 166 SecStr :HS T----T EEEEEEE GGGGGG S HHHHHHHH-HHTT EEEEE TTT TTHHHHHHHHHH: ExpBur :ebee----ebbbbbbbbebeeeeeeebeeeebeebb-eeeebbbebbbbeeeeebeebbeebbe: Contact : bb bb bbb |