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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [164 aa] | Ras-related protein Rab-5C :RAB5C_HUMAN | |
2 | b | M 1 (B) | non-polymer(GNP) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 16D(E) 17S 18G(A) 19V 20G 21K 22T(S) 23S 33F 34S(H) 35N(E) 38K(E) 39A(S) 40T 64T 66G 67Q(L) 125N 126K 128D 129L 155S 156A 157K (identity: 66.7 %/44.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4kyi_B_1 identity=44.3% |
queryA 9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108 : * ** * *** ** * * **** *** * ** * ****** ** ** **** * * * ** * * : 4kyi_B_1 10:FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGLERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQR: 109 SecStr :EEEEEE TTSSHHHHHHHHHT TT SEEEEEEEEEETTEEEEEEEEEE SGGGGGGHHHHHSS SEEEEEEETT HHHHHHHHHHHHHHHH: ExpBur :bbbbbbbeeebbbebbbbebeeeeeeeeeeebeeeeeeeeebebeeeebbbebebbbbeeeeeeebeebbeebebbbbbbbbeeeebbebbeebbeebee: Contact : bbbbbbbb bbb bbb b bb queryA 109:QASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171 :**** * *** ** * * *** * ***** * ** * ** : 4kyi_B_1 110:QASP----NIVIALAGNKADLASKRAVEFQEAQAYA-DDNSLLFMETSAKTAMNVNEIFMAIAK: 168 SecStr :HS T----T EEEEEEE TT GGG S HHHHHHHH-HHTT EEEE BTTTTBTHHHHHHHHHH: ExpBur :ebee----ebbbbbbbbebeeeeeeebeeeebeebb-eeeebbbebbbbeeeeebeebbebbbe: Contact : bb bb bbb |