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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [173 aa] | RAS-RELATED PROTEIN RAB4A :RAB4A_HUMAN | |
2 | b | J 1 (B) | non-polymer(GNP) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 16D(N) 17S(A) 18G 19V(T) 20G 21K 22T(S) 23S(C) 33F 34S(K) 35N(D) 37Y(S) 39A(H) 40T 65A 66G 125N 126K 128D 129L 155S 156A 157K(L) (identity: 56.5 %/39.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2bme_B_1 identity=39.6% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107 :* * * * ** * * *** *** * * * * *********** * **** ** * * * * * *: 2bme_B_1 10:LFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNW----L: 105 SecStr :EEEEEEEESTTSSHHHHHHHHHHSS TT SSEEEEEEEEEETTEEEEEEEEEE SGGGHHHHHTT TT SEEEEEEETT HHHHHTHHHH----H: ExpBur :ebebbbbbbeebbbbbbbbbbeeeeeeeeeeebeeeeebeeebebeeeebebebebbbbeeebbeebeeebeebebbbbbbbbbeeebbebbeeb----b: Contact : bbbbbbbb bbb b bb bb queryA 108:IQASPRDPENFPFVVLGNKIDLE-NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ: 176 : * * *** ** * * * * **** *** ** ** * : 2bme_B_1 106:TDARMLASQNIVIILCGNKKDLDADREVTFLEASRFA-QENELMFLETSALTGENVEEAFVQCARKILNK: 174 SecStr :HHHHHHS TT EEEEEEE GGGGGG S HHHHHHHH-HHTT EEEE TTT TTHHHHHHHHHHHHHHH: ExpBur :ebbeeebeeebbbbbbbbebeeeeeeebeeeebeebb-eeeebebbbbbbeeeeebeebbbbbbeebbee: Contact : bb bb bbb |