Protein Model on 5lef_B_1_I_1
(TEMPLATE: 
5lef
)Protein Model on 5lef_B_1_I_1
(TEMPLATE: 5lef
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [159 aa] | Ras-related protein Rab-6A :RAB6A_HUMAN | |
| 2 | b | I 1 (B) | non-polymer(GTP) | GUANOSINE-5'-TRIPHOSPHATE | 16D(E) 17S(Q) 18G(S) 19V 20G 21K 22T 23S 33F 34S(D) 35N 36Q(T) 37Y 39A 40T 66G 125N 126K 128D 129L 155S 156A 157K (identity: 78.3 %/39.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5lef_B_1 identity=39.5% |
queryA 9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108
: * ** ****** * * * **** *** * ** * * ***** *** ** * * * * * * * * * :
5lef_B_1 10:FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMXXXDRTVRLQLWDTAGLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRT: 109
SecStr : EEEEE STTSSHHHHHHHHHHS SS SEEEEEE --- EEEEEE SGGGGGGSHHHHHH SEEEEEEETT HHHHHHHHHHHHHHHH:
ExpBur :bebbbbbbeebbbeebbeebbeeeeeeeeebbebbeebeeee---eeebebebbbbbbeeebeeebeeebeebbbbbbbbbbbeeebbeebeebbeebee:
Contact : bbbbbbbb bbbbb bb b
queryA 109:QASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
: *** ** *** * ***** ** * * *:
5lef_B_1 110:ERGS----DVIIMLVGNKTDLADKRQVSIEEGERKA-KELNVMFIETSAKAGYNVKQLFRRVA: 167
SecStr :HHTT----SSEEEEEEE TT GGG S HHHHHHHH-HHHT EEEEEBTTTTBTHHHHHHHHH:
ExpBur :eeee----ebbbbbbbbbbeeeeeeebeeeebeebb-eeeebebbbbbbeeeeebeebbeebe:
Contact : bb bb bbb
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[assembly_id:1]
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